Canu is a fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II or Oxford Nanopore MinION).
CD-HIT is a very widely used program for clustering and comparing protein or nucleotide sequences.
This software has multiple names; Celera Assembler, or wgs, which stands for Whole-Genome Shotgun Assembler
The Chromium Single Cell CNV Solution provides a comprehensive, scalable approach to high resolution copy number profiling of hundreds to thousands of cells in a single sample.
CentroidFold predicts an RNA secondary structure from an RNA sequence.
A tool to circularize genome assemblies.
ClonalFrameML is a a software package that performs efficient inference of recombination in bacterial genomes.
Clustal Omega: the last alignment program you'll ever need.