Bioinformatics

BBmap

BBmap is a program for Short read aligner for DNA and RNA-seq data.

Bcftools

Bcftools is a program for variant calling and manipulating VCFs and BCFs.

beagle-lib

beagle-lib is a library of GPU based functions for phylogenetic analysis.

BEAST

BEAST is a phylogenetic analysis program.

BEDTools

BEDTools are a set of utilities for genomics analysis.

Bioawk

Bioawk is an extension to Brian Kernighan's awk, adding the support of several common biological data formats, including optionally gzip'ed BED, GFF, SAM, VCF, FASTA/Q and TAB-delimited formats with column names.

BioBloom Tools

BioBloom Tools (BBT) is a general use fast sequence categorization tool utilizing Bloom filters.

BioPerl

Bioperl is a complex collection of bioinformatics tools.

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